The detailed information of tRNA gene sequence


Sequence ID>CHL1810002201
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 46722
End posion on genome 46796
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
taaatttttT
tRNA gene sequence 
GGGTCTATCGTCTAAGGGATTAGGACAGTAACCTTCTAAGTTTCTAATGTAGGTTCGAAT
CCTACTAGACCCATtt
Downstream region at tRNA end position 
ttttcatatt
Secondary structure (Cloverleaf model)
>CHL1810002201	Arg	TCT
                   T      ATtt ttttcatatt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     A - T          T A
                    T     C A T C C     A
      G A A        C      | | | | |     G
    G       T C T G       G T A G G     C
    G       + | | |                 T T
    A       G G A C
      T T A        A     TAAT
                    G - C
                    T   T
                    A - T
                    A - T
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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