The detailed information of tRNA gene sequence


Sequence ID>CHL1810002211
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 92846
End posion on genome 92771
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
taattatttT
tRNA gene sequence 
AAGTACGTAGCTCAGTGGATTAGAGCGTTAGACTCCGGATCTAAAAGTCAGGGGTTCAAA
TCCCCTCGTGCTTAAat
Downstream region at tRNA end position 
ttatgaaggg
Secondary structure (Cloverleaf model)
>CHL1810002211	Arg	CCG
                   T      AAat ttatgaaggg
                     A - T
                     A - T
                     G - C
                     T + G
                     A - T
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        A      | | | | |     A
    G       C T C G       A G G G G     C
    G       | | | |                 T T
    A       G A G C
      T T A        G     AAGTC
                    T - A
                    T - A
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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