The detailed information of tRNA gene sequence


Sequence ID>CHL1810002212
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 92445
End posion on genome 92362
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctataaaaaa
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTCGAAGGCACCGGACTCATAATCCGTTTTCGAAAGAACATCG
CTGGTTCGAACCCAGTCGGATGCAtac
Downstream region at tRNA end position 
ttaattttct
Secondary structure (Cloverleaf model)
>CHL1810002212	Met	CAT
                   a      Atac ttaattttct
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      + | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      C G A        A     TTTCGAAAGAACATC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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