The detailed information of tRNA gene sequence


Sequence ID>CHL1810002213
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 86324
End posion on genome 86251
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ataatccaaa
tRNA gene sequence 
CGGGATATAGCGCAGCTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGTAGGTTCAAA
TCCTACTATCCCGAttt
Downstream region at tRNA end position 
tataagtctt
Secondary structure (Cloverleaf model)
>CHL1810002213	Pro	TGG
                   a      Attt tataagtctt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    T       C G C G       G T A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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