The detailed information of tRNA gene sequence


Sequence ID>CHL1810002214
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 60764
End posion on genome 60692
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttataaggta
tRNA gene sequence 
GCGCTCTTAGTTCAGTTGGTAGAACGTCGGTTTCCAAAACCGAATGTCGAGGGTTCAAGT
CCTTCAGAGCGCGata
Downstream region at tRNA end position 
gaataaagtg
Secondary structure (Cloverleaf model)
>CHL1810002214	Trp	CCA
                   a      Gata gaataaagtg
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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