The detailed information of tRNA gene sequence


Sequence ID>CHL1810002219
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 9917
End posion on genome 9844
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgttttgtaa
tRNA gene sequence 
CGCGGAGTAGAGCAGCTTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCTCCGCTAtca
Downstream region at tRNA end position 
tttttaaaat
Secondary structure (Cloverleaf model)
>CHL1810002219	Met	CAT
                   a      Atca tttttaaaat
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      C G A        A      | | | | |     A
    T       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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