The detailed information of tRNA gene sequence


Sequence ID>CHL1810002220
Genome IDGQ231542
Search identical group
Phylum/ClassStramenopiles
SpeciesAureoumbra lagunensis CCMP 1507 (GQ231542)
Start position on genome 9235
End posion on genome 9151
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatttttagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCTGATTTGAAATCAGTTGAACTTAATTGTTCC
GGGGGTTCGAATCCCTCTCTCTCCTtga
Downstream region at tRNA end position 
aaaattctat
Secondary structure (Cloverleaf model)
>CHL1810002220	Ser	TGA
                   c      Ttga aaaattctat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G T C G       G G G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGAACTTAATTGTTCC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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