The detailed information of tRNA gene sequence


Sequence ID>CHL1810002573
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 62624
End posion on genome 62708
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttccaataa
tRNA gene sequence 
GCATTCGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCCTCTGGAACGTC
ACTGGTTCGAACCCAGTCGAATGCAaat
Downstream region at tRNA end position 
gaagaatttt
Secondary structure (Cloverleaf model)
>CHL1810002573	Met	CAT
                   a      Aaat gaagaatttt
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCCTCTGGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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