The detailed information of tRNA gene sequence


Sequence ID>CHL1810002586
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 90580
End posion on genome 90510
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ctatattttt
tRNA gene sequence 
GGCGGTATGGCCAAGTGGTAAGGCAGTGGATTGCAAATCCTCTATCCCCAGTTCGAATCT
GGGTGCCGCCTtta
Downstream region at tRNA end position 
aatatacatc
Secondary structure (Cloverleaf model)
>CHL1810002586	Cys	GCA
                   t      Ttta aatatacatc
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T A
                    T     G G G T C     A
        G A        G      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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