The detailed information of tRNA gene sequence


Sequence ID>CHL1810002588
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 70460
End posion on genome 70387
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gaataaataa
tRNA gene sequence 
CGGGATATAGCTCAGTTTGGTAGAGTACCTGCTTTGGGAGCAGGGTGCCGTAGGTTCAAA
TCCTACTATCCCGAtat
Downstream region at tRNA end position 
aaaatatact
Secondary structure (Cloverleaf model)
>CHL1810002588	Pro	TGG
                   a      Atat aaaatatact
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C A T C C     A
      T G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        A     GTGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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