The detailed information of tRNA gene sequence


Sequence ID>CHL1810002591
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 42245
End posion on genome 42157
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggttaatttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAATTCTTTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTAtt
Downstream region at tRNA end position 
ttaataaaac
Secondary structure (Cloverleaf model)
>CHL1810002591	Ser	GCT
                   A      TAtt ttaataaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAATTCTTTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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