The detailed information of tRNA gene sequence


Sequence ID>CHL1810002592
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 42093
End posion on genome 42018
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaaaacattT
tRNA gene sequence 
GGGATTGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGAGTTCGAG
TCTCGTCAGTCCCGTtt
Downstream region at tRNA end position 
taaaaatatg
Secondary structure (Cloverleaf model)
>CHL1810002592	Asp	GTC
                   T      GTtt taaaaatatg
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     G
    T       C T T G       G C G A G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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