The detailed information of tRNA gene sequence


Sequence ID>CHL1810002596
Genome IDGU323224
Search identical group
Phylum/ClassStramenopiles
SpeciesThalassiosira oceanica CCMP1005 (GU323224)
Start position on genome 35074
End posion on genome 34987
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctagtctatt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCTTTACGGAT
TCCGTGGGTTCGAATCCCACTCTCGCCTttt
Downstream region at tRNA end position 
ttttaaacat
Secondary structure (Cloverleaf model)
>CHL1810002596	Ser	TGA
                   t      Tttt ttttaaacat
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCTTTACGGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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