The detailed information of tRNA gene sequence


Sequence ID>CHL1810006616
Genome IDJX827163
Search identical group
Phylum/ClassViridiplantae
SpeciesApopellia endiviifolia (JX827163)
Start position on genome 42844
End posion on genome 42771
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atgtgcggaa
tRNA gene sequence 
CGCGGGGTAGAGCAGTCTGGTAGCTCGCAAGGCTCATAACCTTGAGGTCATAGGTTCGAA
TCCTGTCTCCGCCAtgt
Downstream region at tRNA end position 
gtttgttctc
Secondary structure (Cloverleaf model)
>CHL1810006616	Met	CAT
                   a      Atgt gtttgttctc
                     C   C
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | + | | |     G
    C       C G A G       A T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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