The detailed information of tRNA gene sequence


Sequence ID>CHL1810006652
Genome IDKC012944
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis gaditana 3B (KC012944)
Start position on genome 13446
End posion on genome 13534
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataataaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACAAGCTTAATTG
TACCGAGGGTTCGAATCCCTTTCTCTCCTagg
Downstream region at tRNA end position 
cttatttata
Secondary structure (Cloverleaf model)
>CHL1810006652	Ser	GCT
                   t      Tagg cttatttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAAGCTTAATTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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