The detailed information of tRNA gene sequence


Sequence ID>CHL1810006661
Genome IDKC012944
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis gaditana 3B (KC012944)
Start position on genome 64510
End posion on genome 64583
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaggtaac
tRNA gene sequence 
GGCGGGGTAGAGCAGATTGGTAGCTCGTTGGGCTCATAATCCGAAGGTCAGTGGTTCAAG
TCCACTCTCCGCTAtaa
Downstream region at tRNA end position 
atagccgtct
Secondary structure (Cloverleaf model)
>CHL1810006661	Met	CAT
                   c      Ataa atagccgtct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T C A C C     A
      A G A        A      | | | | |     A
    T       C G A G       A G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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