The detailed information of tRNA gene sequence


Sequence ID>CHL1810006662
Genome IDKC012944
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis gaditana 3B (KC012944)
Start position on genome 65157
End posion on genome 65244
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tatgatctta
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGATTGCGTCTGACTTGAAATCAGAAGAACTAGGAATGGTT
CCGTGGGTTCGAATCCCACTCTCTCTTCtc
Downstream region at tRNA end position 
aatacttgta
Secondary structure (Cloverleaf model)
>CHL1810006662	Ser	TGA
                   a      TCtc aatacttgta
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     AGAACTAGGAATGGTTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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