The detailed information of tRNA gene sequence


Sequence ID>CHL1810006672
Genome IDKC012944
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis gaditana 3B (KC012944)
Start position on genome 46618
End posion on genome 46533
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcttatac
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCTCTCAAGAACGT
CGCTGGTTCGAACCCAGCCGGATGCAtta
Downstream region at tRNA end position 
aaatctttaa
Secondary structure (Cloverleaf model)
>CHL1810006672	Met	CAT
                   c      Atta aaatctttaa
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCTCTCAAGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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