The detailed information of tRNA gene sequence


Sequence ID>CHL1810008270
Genome IDKC509520
Search identical group
Phylum/ClassStramenopiles
SpeciesAsterionellopsis glacialis ccmp1717 (KC509520)
Start position on genome 39369
End posion on genome 39453
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccataata
tRNA gene sequence 
GCATTCGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCCCCTGGAACGTC
ACTGGTTCGAACCCAGTCGAATGCAgat
Downstream region at tRNA end position 
ttgattattt
Secondary structure (Cloverleaf model)
>CHL1810008270	Met	CAT
                   a      Agat ttgattattt
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCCCCTGGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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