The detailed information of tRNA gene sequence


Sequence ID>CHL1810008285
Genome IDKC509520
Search identical group
Phylum/ClassStramenopiles
SpeciesAsterionellopsis glacialis ccmp1717 (KC509520)
Start position on genome 35553
End posion on genome 35479
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ataataataT
tRNA gene sequence 
GCGTCTTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCAAGT
CCTTCAAGGCGCGTtt
Downstream region at tRNA end position 
ctctttatat
Secondary structure (Cloverleaf model)
>CHL1810008285	Trp	CCA
                   T      GTtt ctctttatat
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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