The detailed information of tRNA gene sequence


Sequence ID>CHL1810008290
Genome IDKC509520
Search identical group
Phylum/ClassStramenopiles
SpeciesAsterionellopsis glacialis ccmp1717 (KC509520)
Start position on genome 11278
End posion on genome 11190
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcttggtttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCGAAAGCAATAGATTGCTAATCTATCGTACAATTATTTGTA
CCCAGGGTTCGAATCCCTGTTTCTCCTTat
Downstream region at tRNA end position 
taaaaaacta
Secondary structure (Cloverleaf model)
>CHL1810008290	Ser	GCT
                   A      TTat taaaaaacta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     CGTACAATTATTTGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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