The detailed information of tRNA gene sequence


Sequence ID>CHL1810008346
Genome IDKC509522
Search identical group
Phylum/ClassStramenopiles
SpeciesCylindrotheca closterium ccmp1855 (KC509522)
Start position on genome 2741
End posion on genome 2650
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattagtttA
tRNA gene sequence 
GGAGAAATGGCTGAGTGGTCTAAAGCAATAGATTGCTAATCTATCGTACAAGTTTTAATG
TACCCAGGGTTCGAATCCCTGTTTCTCCTGCa
Downstream region at tRNA end position 
ttagaatatt
Secondary structure (Cloverleaf model)
>CHL1810008346	Ser	GCT
                   A      TGCa ttagaatatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         | | |                 T T
    T       A A G C
      C T A        A     CGTACAAGTTTTAATGTACC
                    A - T
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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