The detailed information of tRNA gene sequence


Sequence ID>CHL1810008347
Genome IDKC509522
Search identical group
Phylum/ClassStramenopiles
SpeciesCylindrotheca closterium ccmp1855 (KC509522)
Start position on genome 2583
End posion on genome 2510
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attttagata
tRNA gene sequence 
GGGATTGTAGCTTAATTGGTTAGAGTACCGCCCTGTCACGGCGGAAGTTGCGAGTTCGAG
TCTCGTCAGTCCCGttt
Downstream region at tRNA end position 
taaaaccgtt
Secondary structure (Cloverleaf model)
>CHL1810008347	Asp	GTC
                   a      Gttt taaaaccgtt
                     G - C
                     G - C
                     G - C
                     A - T
                     T + G
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T A A        A      + | | | |     G
    T       T T C G       G C G A G     C
    G       + | | +                 T T
    G       G A G T
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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