The detailed information of tRNA gene sequence


Sequence ID>CHL1810008355
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 30573
End posion on genome 30659
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccattctT
tRNA gene sequence 
GCATTCGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCCTATGGAACGTC
ACTGGTTCGAACCCAGTCGAATGCATat
Downstream region at tRNA end position 
aaatcatttt
Secondary structure (Cloverleaf model)
>CHL1810008355	Met	CAT
                   T      ATat aaatcatttt
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCCTATGGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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