The detailed information of tRNA gene sequence


Sequence ID>CHL1810008363
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 117859
End posion on genome 117784
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
ctttttaatT
tRNA gene sequence 
CGGGATATAGCTCAGCTTGGTAGAGCACCTGCTTTGGGAGCAGGGTGTCGTAGGTTCAAA
TCCTACTATCCCGATtc
Downstream region at tRNA end position 
tcgcaatttt
Secondary structure (Cloverleaf model)
>CHL1810008363	Pro	TGG
                   T      ATtc tcgcaatttt
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     A
    T       C T C G       G T A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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