The detailed information of tRNA gene sequence


Sequence ID>CHL1810008369
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 26882
End posion on genome 26809
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gtaacataac
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCAAGT
CCTTCAGGGCGCGCtt
Downstream region at tRNA end position 
ctcttttttt
Secondary structure (Cloverleaf model)
>CHL1810008369	Trp	CCA
                   c      GCtt ctcttttttt
                     G - C
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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