The detailed information of tRNA gene sequence


Sequence ID>CHL1810008370
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 24905
End posion on genome 24830
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttatgcgtgT
tRNA gene sequence 
CGCGGAGTAGAGCAGCCTGGTAGCTCGTTGGGCTCATAACCCGAAGGTCAATGGTTCAAA
TCCATTCTCCGCTATaa
Downstream region at tRNA end position 
attttgataa
Secondary structure (Cloverleaf model)
>CHL1810008370	Met	CAT
                   T      ATaa attttgataa
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T A C C     A
      C G A        A      | | | | |     A
    C       C G A G       A A T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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