The detailed information of tRNA gene sequence


Sequence ID>CHL1810008371
Genome IDKC509523
Search identical group
Phylum/ClassStramenopiles
SpeciesDidymosphenia geminata BCC011 (KC509523)
Start position on genome 24284
End posion on genome 24197
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctaatctttt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCCTTGCAGAT
TCCGTGGGTTCGAATCCCACTCTCGCCTtta
Downstream region at tRNA end position 
atatactatt
Secondary structure (Cloverleaf model)
>CHL1810008371	Ser	TGA
                   t      Ttta atatactatt
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCCTTGCAGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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