The detailed information of tRNA gene sequence


Sequence ID>CHL1810008376
Genome IDKC509524
Search identical group
Phylum/ClassStramenopiles
SpeciesLeptocylindrus danicus ccmp1856 (KC509524)
Start position on genome 13902
End posion on genome 13989
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
taatcttatt
tRNA gene sequence 
GGCGAGATGGCAGAGTTGGTCGATTGCGTCTGATTTGAAATCAGATGAATCCGCAAGGAT
TCCGTGGGTTCGAATCCCACTCTCGCCTttt
Downstream region at tRNA end position 
gtttaatcta
Secondary structure (Cloverleaf model)
>CHL1810008376	Ser	TGA
                   t      Tttt gtttaatcta
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    T T G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TGAATCCGCAAGGATTCC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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