The detailed information of tRNA gene sequence


Sequence ID>CHL1810008379
Genome IDKC509524
Search identical group
Phylum/ClassStramenopiles
SpeciesLeptocylindrus danicus ccmp1856 (KC509524)
Start position on genome 24356
End posion on genome 24440
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctccaataaa
tRNA gene sequence 
GCATTCGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCCTATGGAACGTC
ACTGGTTCGAACCCAGTCGAATGCAtta
Downstream region at tRNA end position 
ttactttcta
Secondary structure (Cloverleaf model)
>CHL1810008379	Met	CAT
                   a      Atta ttactttcta
                     G - C
                     C - G
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C          C A
                    T     T G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       A C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCCTATGGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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