The detailed information of tRNA gene sequence


Sequence ID>CHL1810008407
Genome IDKC509525
Search identical group
Phylum/ClassStramenopiles
SpeciesLithodesmium undulatum ccmp1797 (KC509525)
Start position on genome 27612
End posion on genome 27686
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tatatagtaC
tRNA gene sequence 
GCGTCCTTAGTTCAGTTGGTAGAACGCTAGTCTCCAAAATTAGATGTCGAGGGTTCGAGT
CCTTCAGGACGCGTtt
Downstream region at tRNA end position 
ctcttcgctt
Secondary structure (Cloverleaf model)
>CHL1810008407	Trp	CCA
                   C      GTtt ctcttcgctt
                     G - C
                     C - G
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    C - G
                    T - A
                    A - T
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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