The detailed information of tRNA gene sequence


Sequence ID>CHL1810008408
Genome IDKC509525
Search identical group
Phylum/ClassStramenopiles
SpeciesLithodesmium undulatum ccmp1797 (KC509525)
Start position on genome 47874
End posion on genome 47947
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
aagttataaA
tRNA gene sequence 
GCTGGTGTAGCTCAATGGTAGAGCAACGGATTTGTAATCCGTAGGTTGGGGGTTCAAATC
CCTTCACCAGCTAgt
Downstream region at tRNA end position 
aaaaaatttc
Secondary structure (Cloverleaf model)
>CHL1810008408	Thr	TGT
                   A      TAgt aaaaaatttc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T T C C C     A
        A A        A      + + | | |     A
      T     C T C G       G G G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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