The detailed information of tRNA gene sequence


Sequence ID>CHL1810008409
Genome IDKC509525
Search identical group
Phylum/ClassStramenopiles
SpeciesLithodesmium undulatum ccmp1797 (KC509525)
Start position on genome 48359
End posion on genome 48440
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
aaagtaaata
tRNA gene sequence 
GGGTCGGTGCCCGAGTGGTTAAAGGGGGCGGATTGTAAATCCGCTGCGTTATGCTACGTT
GGTTCAAATCCAACTCGGCCCAata
Downstream region at tRNA end position 
gatgttaaaa
Secondary structure (Cloverleaf model)
>CHL1810008409	Tyr	GTA
                   a      Aata gatgttaaaa
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C
                     G + T          T A
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G C C C       G T T G G     C
    G         | | |                 T T
    T       A G G G
      T A A        G     TGCGTTATGCTAC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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