The detailed information of tRNA gene sequence


Sequence ID>CHL1810008412
Genome IDKC509525
Search identical group
Phylum/ClassStramenopiles
SpeciesLithodesmium undulatum ccmp1797 (KC509525)
Start position on genome 68993
End posion on genome 69066
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaattcaaa
tRNA gene sequence 
GGGCTATTAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCTCTGGTTCAAA
TCCAGAATGGCCCAgcg
Downstream region at tRNA end position 
ggggtatagc
Secondary structure (Cloverleaf model)
>CHL1810008412	Ile	GAT
                   a      Agcg ggggtatagc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     A - T
                     T - A          T A
                    T     A G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       T C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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