The detailed information of tRNA gene sequence


Sequence ID>CHL1810008566
Genome IDKC573041
Search identical group
Phylum/ClassHaptophyceae
SpeciesPavlova lutheri ATCC 50092 (KC573041)
Start position on genome 78856
End posion on genome 78942
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agataattct
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGTTGAAAGCTTCAAATTGCTAATTTGACGTACAAAATTTTGTA
CCAGGGGTTCGAATCCCCTTCTCTCCTata
Downstream region at tRNA end position 
aaaatcaagt
Secondary structure (Cloverleaf model)
>CHL1810008566	Ser	GCT
                   t      Tata aaaatcaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       G T C G       A G G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        T     CGTACAAAATTTTGTACC
                    T - A
                    C - G
                    A - T
                    A - T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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