The detailed information of tRNA gene sequence


Sequence ID>CHL1810008579
Genome IDKC573041
Search identical group
Phylum/ClassHaptophyceae
SpeciesPavlova lutheri ATCC 50092 (KC573041)
Start position on genome 46018
End posion on genome 45946
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttctcatata
tRNA gene sequence 
GCGTCCTTAGTTCAGCTGGTAGAACGTTGGTCTCCAAAACCAAGTGTCGAGGGTTCAAGT
CCTTCAGGGCGTGttt
Downstream region at tRNA end position 
acagacttaa
Secondary structure (Cloverleaf model)
>CHL1810008579	Trp	CCA
                   a      Gttt acagacttaa
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     C - G
                     T - A          T G
                    T     C T T C C     A
      C G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     GTGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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