The detailed information of tRNA gene sequence


Sequence ID>CHL1810008617
Genome IDKC598085
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis granulata (KC598085)
Start position on genome 11043
End posion on genome 11116
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcaactaa
tRNA gene sequence 
GGGGTTGTAGCTTAATTGGTTAGAGTACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
TCCCGTCAATCCCGatt
Downstream region at tRNA end position 
attctattca
Secondary structure (Cloverleaf model)
>CHL1810008617	Asp	GTC
                   a      Gatt attctattca
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       T T C G       G C G G G     C
    G       + | | +                 T T
    G       G A G T
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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