The detailed information of tRNA gene sequence


Sequence ID>CHL1810008640
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 6544
End posion on genome 6617
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
attagaagta
tRNA gene sequence 
GCGTCTTTAGTTCAGTTGGTAGAACGTAGGTCTCCAAAACCTAATGTCGAGGGTTCAAGT
CCTTCAAGGCGTGCgt
Downstream region at tRNA end position 
tgtattttag
Secondary structure (Cloverleaf model)
>CHL1810008640	Trp	CCA
                   a      GCgt tgtattttag
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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