The detailed information of tRNA gene sequence


Sequence ID>CHL1810008641
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 10898
End posion on genome 10986
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataataaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACAAAATTAATTG
TACCGAGGGTTCGAATCCCTTTCTCTCCTaag
Downstream region at tRNA end position 
gctatttata
Secondary structure (Cloverleaf model)
>CHL1810008641	Ser	GCT
                   t      Taag gctatttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAAAATTAATTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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