The detailed information of tRNA gene sequence


Sequence ID>CHL1810008642
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 11040
End posion on genome 11113
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcaactaa
tRNA gene sequence 
GGGGTTGTAGCTTAATTGGTTAGAGTACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
TCCCGTCAATCCCGatc
Downstream region at tRNA end position 
actctattta
Secondary structure (Cloverleaf model)
>CHL1810008642	Asp	GTC
                   a      Gatc actctattta
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       T T C G       G C G G G     C
    G       + | | +                 T T
    G       G A G T
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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