The detailed information of tRNA gene sequence


Sequence ID>CHL1810008657
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 98124
End posion on genome 98049
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaggtaaT
tRNA gene sequence 
GGCGGGGTAGAGCAGATTGGTAGCTCGTTGGGCTCATAATCCGAAGGTCAGTGGTTCAAG
TCCACTCTCCGCTATaa
Downstream region at tRNA end position 
acaaccgtct
Secondary structure (Cloverleaf model)
>CHL1810008657	Met	CAT
                   T      ATaa acaaccgtct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T C A C C     A
      A G A        A      | | | | |     A
    T       C G A G       A G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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