The detailed information of tRNA gene sequence


Sequence ID>CHL1810008661
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 43991
End posion on genome 43905
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tatattttat
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCTCTCAAGAACGT
CGCTGGTTCGAACCCAGCCGGATGCACtt
Downstream region at tRNA end position 
atgtacactt
Secondary structure (Cloverleaf model)
>CHL1810008661	Met	CAT
                   t      ACtt atgtacactt
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCTCTCAAGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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