The detailed information of tRNA gene sequence


Sequence ID>CHL1810008664
Genome IDKC598087
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis oculata CCMP525 (KC598087)
Start position on genome 5734
End posion on genome 5662
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
ggtggtgttt
tRNA gene sequence 
GCTGGTGTAGCTCAATTGGTAGAGCAACTGATTTGTAATCAGTAGGTTGGGGGTTCAATT
CCCTTCACTAGCTtga
Downstream region at tRNA end position 
aattataaga
Secondary structure (Cloverleaf model)
>CHL1810008664	Thr	TGT
                   t      Ttga aattataaga
                     G - C
                     C - G
                     T - A
                     G + T
                     G - C
                     T - A
                     G - C          T T
                    T     T T C C C     A
      T A A        A      + + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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