The detailed information of tRNA gene sequence


Sequence ID>CHL1810008665
Genome IDKC598088
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis salina CCMP537 (KC598088)
Start position on genome 6574
End posion on genome 6646
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaatgaata
tRNA gene sequence 
GCGTCTTTAGTTCAGTTGGTAGAACGTAGGTCTCCAAAACCTAATGTCGAGGGTTCAAGT
CCTTCAAGGCGTGttt
Downstream region at tRNA end position 
tatatctaat
Secondary structure (Cloverleaf model)
>CHL1810008665	Trp	CCA
                   a      Gttt tatatctaat
                     G + T
                     C - G
                     G - C
                     T + G
                     C - G
                     T - A
                     T - A          T G
                    T     C T T C C     A
      T G A        A      | | + | |     A
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T A          G     ATGTC
                    T - A
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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