The detailed information of tRNA gene sequence


Sequence ID>CHL1810008666
Genome IDKC598088
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis salina CCMP537 (KC598088)
Start position on genome 10923
End posion on genome 11011
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataataaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACAAGCTTAATTG
TACCGAGGGTTCGAATCCCTTTCTCTCCTagg
Downstream region at tRNA end position 
cttatttata
Secondary structure (Cloverleaf model)
>CHL1810008666	Ser	GCT
                   t      Tagg cttatttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAAGCTTAATTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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