The detailed information of tRNA gene sequence


Sequence ID>CHL1810008686
Genome IDKC598088
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis salina CCMP537 (KC598088)
Start position on genome 44036
End posion on genome 43951
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatcttatac
tRNA gene sequence 
GCATCTGTGGCCGAGTGGTTGAAGGCACCGGACTCATAATCCGTTTTCTCTCAAGAACGT
CGCTGGTTCGAACCCAGCCGGATGCAtta
Downstream region at tRNA end position 
aaatctttaa
Secondary structure (Cloverleaf model)
>CHL1810008686	Met	CAT
                   c      Atta aaatctttaa
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     T + G
                     G - C          C A
                    T     C G A C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C T G G     C
    G         | | |                 T T
    T       A G G C
      T G A        A     TTTCTCTCAAGAACGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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