The detailed information of tRNA gene sequence


Sequence ID>CHL1810008690
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 10920
End posion on genome 11008
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aataataaat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGGCAGATTGCTAATCTGTTGTACAAAATTAATTG
TACCGAGGGTTCGAATCCCTTTCTCTCCTaag
Downstream region at tRNA end position 
actatttata
Secondary structure (Cloverleaf model)
>CHL1810008690	Ser	GCT
                   t      Taag actatttata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TGTACAAAATTAATTGTACC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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