The detailed information of tRNA gene sequence


Sequence ID>CHL1810008691
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 11062
End posion on genome 11135
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
attcaactaa
tRNA gene sequence 
GGGGTTGTAGCTTAATTGGTTAGAGTACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAG
TCCCGTCAATCCCGatc
Downstream region at tRNA end position 
gttttacttt
Secondary structure (Cloverleaf model)
>CHL1810008691	Asp	GTC
                   a      Gatc gttttacttt
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T A A        A      + | | | |     G
    T       T T C G       G C G G G     C
    G       + | | +                 T T
    G       G A G T
      T T A        A     AAGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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