The detailed information of tRNA gene sequence


Sequence ID>CHL1810008705
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 100727
End posion on genome 100654
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tatataaatg
tRNA gene sequence 
GTGGGCGTAGCCAAGTGGTTAAGGCAATGGGTTGTGGTTCCGTCATGCGCGGGTTCAAAT
CCCGTCGTTCACCCtc
Downstream region at tRNA end position 
ttagtttagc
Secondary structure (Cloverleaf model)
>CHL1810008705	His	GTG
                   g      CCtc ttagtttagc
                     G - C
                     T - A
                     G - C
                     G + T
                     G + T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     A
    G       A C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     CATGC
                    A - T
                    T + G
                    G - C
                    G - C
                    G + T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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