The detailed information of tRNA gene sequence


Sequence ID>CHL1810008706
Genome IDKC598089
Search identical group
Phylum/ClassStramenopiles
SpeciesNannochloropsis limnetica CCMP505 (KC598089)
Start position on genome 98441
End posion on genome 98366
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attaggtaaT
tRNA gene sequence 
GGCGGGGTAGAGCAGATTGGTAGCTCGTTGGGCTCATAATCCGAAGGTCAGTGGTTCAAG
TCCACTCTCCGCTATaa
Downstream region at tRNA end position 
acagccgtct
Secondary structure (Cloverleaf model)
>CHL1810008706	Met	CAT
                   T      ATaa acagccgtct
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G + T
                     G - C          T G
                    T     T C A C C     A
      A G A        A      | | | | |     A
    T       C G A G       A G T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T + G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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